Hierarchy For All Packages

Package Hierarchies:

• io.github.ai4ci,
• io.github.ai4ci.abm,
• io.github.ai4ci.abm.behaviour,
• io.github.ai4ci.abm.builders,
• io.github.ai4ci.abm.inhost,
• io.github.ai4ci.abm.mechanics,
• io.github.ai4ci.abm.policy,
• io.github.ai4ci.abm.riskmodel,
• io.github.ai4ci.config,
• io.github.ai4ci.config.inhost,
• io.github.ai4ci.config.riskmodel,
• io.github.ai4ci.config.setup,
• io.github.ai4ci.flow,
• io.github.ai4ci.output,
• io.github.ai4ci.util

Class Hierarchy

• java.lang.Object
  • java.util.AbstractCollection<E> (implements java.util.Collection<E>)
    • java.util.AbstractList<E> (implements java.util.List<E>)
      • java.util.ArrayList<E> (implements java.lang.Cloneable, java.util.List<E>, java.util.RandomAccess, java.io.Serializable)
        • io.github.ai4ci.util.ShallowList<X>
  • io.github.ai4ci.abm.mechanics.AbstractModelBuilder
    • io.github.ai4ci.abm.builders.AgeStratifiedModelBuilder (implements io.github.ai4ci.abm.builders.AgeStratifiedNetworkSetup, io.github.ai4ci.abm.builders.DefaultOutbreakBaseliner, io.github.ai4ci.abm.builders.DefaultOutbreakInitialiser, io.github.ai4ci.abm.builders.DefaultPersonBaseliner, io.github.ai4ci.abm.builders.DefaultPersonInitialiser)
    • io.github.ai4ci.abm.builders.DefaultModelBuilder (implements io.github.ai4ci.abm.builders.DefaultNetworkSetup, io.github.ai4ci.abm.builders.DefaultOutbreakBaseliner, io.github.ai4ci.abm.builders.DefaultOutbreakInitialiser, io.github.ai4ci.abm.builders.DefaultPersonBaseliner, io.github.ai4ci.abm.builders.DefaultPersonInitialiser)
  • io.github.ai4ci.abm.builders.BuilderFactory
  • io.github.ai4ci.abm.Calibration
  • io.github.ai4ci.util.Cloner
  • io.github.ai4ci.output.ContactCSV.Selector (implements io.github.ai4ci.Export.Selector)
  • io.github.ai4ci.util.Conversions
  • io.github.ai4ci.output.CSVMapper
    • io.github.ai4ci.output.CSVMapperImpl
  • io.github.ai4ci.util.CSVUtil
  • io.github.ai4ci.flow.CSVWriter<X> (implements java.io.Closeable)
  • io.github.ai4ci.output.DebugParametersCSV.Selector (implements io.github.ai4ci.Export.Selector)
  • org.jgrapht.graph.DefaultWeightedEdge
    • io.github.ai4ci.abm.SocialRelationship (implements java.io.Serializable)
  • io.github.ai4ci.util.DelayDistribution (implements java.io.Serializable)
    • io.github.ai4ci.util.ImmutableDelayDistribution
  • io.github.ai4ci.util.Ephemeral<T> (implements java.io.Serializable)
  • io.github.ai4ci.flow.ExecutionBuilder
  • io.github.ai4ci.abm.HistoryMapper
    • io.github.ai4ci.abm.HistoryMapperImpl
  • io.github.ai4ci.config.setup.ImmutableAgeStratifiedNetworkConfiguration (implements io.github.ai4ci.config.setup.AgeStratifiedNetworkConfiguration)
  • io.github.ai4ci.config.setup.ImmutableAgeStratifiedNetworkConfiguration.Builder (implements io.github.ai4ci.config.setup.AgeStratifiedNetworkConfiguration.Builder)
  • io.github.ai4ci.config.ImmutableAgeStratifiedNetworkFacet (implements io.github.ai4ci.config.ExperimentFacet.AgeStratifiedNetworkFacet)
  • io.github.ai4ci.config.ImmutableAgeStratifiedNetworkFacet.Builder
  • io.github.ai4ci.config.ImmutableBatchConfiguration (implements io.github.ai4ci.config.BatchConfiguration)
  • io.github.ai4ci.config.ImmutableBatchConfiguration.Builder
  • io.github.ai4ci.abm.inhost.ImmutableBiPhasicLogistic (implements io.github.ai4ci.abm.inhost.ExposureModel.BiPhasicLogistic)
  • io.github.ai4ci.abm.inhost.ImmutableBiPhasicLogistic.Builder
  • io.github.ai4ci.abm.ImmutableContact (implements io.github.ai4ci.abm.Contact)
  • io.github.ai4ci.abm.ImmutableContact.Builder
  • io.github.ai4ci.output.ImmutableContactCSV (implements io.github.ai4ci.output.ContactCSV)
  • io.github.ai4ci.output.ImmutableContactCSV.Builder
  • io.github.ai4ci.output.ImmutableDebugParametersCSV (implements io.github.ai4ci.output.DebugParametersCSV)
  • io.github.ai4ci.output.ImmutableDebugParametersCSV.Builder
  • io.github.ai4ci.util.ImmutableDelayDistribution.Builder
  • io.github.ai4ci.util.ImmutableEmpiricalDistribution (implements io.github.ai4ci.util.EmpiricalDistribution)
  • io.github.ai4ci.util.ImmutableEmpiricalDistribution.Builder
  • io.github.ai4ci.util.ImmutableEmpiricalFunction (implements io.github.ai4ci.util.EmpiricalFunction)
  • io.github.ai4ci.util.ImmutableEmpiricalFunction.Builder
  • io.github.ai4ci.config.ImmutableExecutionConfiguration (implements io.github.ai4ci.config.ExecutionConfiguration)
  • io.github.ai4ci.config.ImmutableExecutionConfiguration.Builder
  • io.github.ai4ci.config.ImmutableExecutionFacet (implements io.github.ai4ci.config.ExperimentFacet.ExecutionFacet)
  • io.github.ai4ci.config.ImmutableExecutionFacet.Builder
  • io.github.ai4ci.config.ImmutableExperimentConfiguration (implements io.github.ai4ci.config.ExperimentConfiguration)
  • io.github.ai4ci.config.ImmutableExperimentConfiguration.Builder
  • io.github.ai4ci.abm.ImmutableExposure (implements io.github.ai4ci.abm.Exposure)
  • io.github.ai4ci.abm.ImmutableExposure.Builder
  • io.github.ai4ci.abm.inhost.ImmutableExposureModel (implements io.github.ai4ci.abm.inhost.ExposureModel)
  • io.github.ai4ci.abm.inhost.ImmutableExposureModel.Builder
  • io.github.ai4ci.util.ImmutableFixedValueFunction (implements io.github.ai4ci.util.FixedValueFunction)
  • io.github.ai4ci.util.ImmutableFixedValueFunction.Builder
  • io.github.ai4ci.util.ImmutableHistogramDistribution (implements io.github.ai4ci.util.HistogramDistribution)
  • io.github.ai4ci.util.ImmutableHistogramDistribution.Builder
  • io.github.ai4ci.output.ImmutableInfectivityProfileCSV (implements io.github.ai4ci.output.InfectivityProfileCSV)
  • io.github.ai4ci.output.ImmutableInfectivityProfileCSV.Builder
  • io.github.ai4ci.abm.inhost.ImmutableInHostMarkovState (implements io.github.ai4ci.abm.inhost.InHostMarkovState)
  • io.github.ai4ci.abm.inhost.ImmutableInHostMarkovState.Builder
  • io.github.ai4ci.abm.inhost.ImmutableInHostMarkovStateMachine (implements io.github.ai4ci.abm.inhost.InHostMarkovState.InHostMarkovStateMachine)
  • io.github.ai4ci.abm.inhost.ImmutableInHostMarkovStateMachine.Builder
  • io.github.ai4ci.abm.inhost.ImmutableInHostPhenomenologicalState (implements io.github.ai4ci.abm.inhost.InHostPhenomenologicalState)
  • io.github.ai4ci.abm.inhost.ImmutableInHostPhenomenologicalState.Builder
  • io.github.ai4ci.abm.inhost.ImmutableInHostStochasticState (implements io.github.ai4ci.abm.inhost.InHostStochasticState)
  • io.github.ai4ci.abm.inhost.ImmutableInHostStochasticState.Builder
  • io.github.ai4ci.abm.riskmodel.ImmutableKernel (implements io.github.ai4ci.abm.riskmodel.Kernel)
  • io.github.ai4ci.abm.riskmodel.ImmutableKernel.Builder
  • io.github.ai4ci.config.inhost.ImmutableMarkovStateModel (implements io.github.ai4ci.config.inhost.MarkovStateModel)
  • io.github.ai4ci.config.inhost.ImmutableMarkovStateModel.Builder
  • io.github.ai4ci.abm.ImmutableOutbreakBaseline (implements io.github.ai4ci.abm.OutbreakBaseline)
  • io.github.ai4ci.abm.ImmutableOutbreakBaseline.Builder
  • io.github.ai4ci.output.ImmutableOutbreakConfigurationJson (implements io.github.ai4ci.output.OutbreakConfigurationJson)
  • io.github.ai4ci.output.ImmutableOutbreakConfigurationJson.Builder
  • io.github.ai4ci.output.ImmutableOutbreakCSV (implements io.github.ai4ci.output.OutbreakCSV)
  • io.github.ai4ci.output.ImmutableOutbreakCSV.Builder
  • io.github.ai4ci.output.ImmutableOutbreakFinalStateCSV (implements io.github.ai4ci.output.OutbreakFinalStateCSV)
  • io.github.ai4ci.output.ImmutableOutbreakFinalStateCSV.Builder
  • io.github.ai4ci.abm.ImmutableOutbreakHistory (implements io.github.ai4ci.abm.OutbreakHistory)
  • io.github.ai4ci.abm.ImmutableOutbreakHistory.Builder
  • io.github.ai4ci.output.ImmutableOutbreakHistoryCSV (implements io.github.ai4ci.output.OutbreakHistoryCSV)
  • io.github.ai4ci.output.ImmutableOutbreakHistoryCSV.Builder
  • io.github.ai4ci.abm.ImmutableOutbreakState (implements io.github.ai4ci.abm.OutbreakState)
  • io.github.ai4ci.abm.ImmutableOutbreakState.Builder
  • io.github.ai4ci.abm.ImmutablePersonBaseline (implements io.github.ai4ci.abm.PersonBaseline)
  • io.github.ai4ci.abm.ImmutablePersonBaseline.Builder
  • io.github.ai4ci.abm.ImmutablePersonDemographic (implements io.github.ai4ci.abm.PersonDemographic)
  • io.github.ai4ci.abm.ImmutablePersonDemographic.Builder
  • io.github.ai4ci.output.ImmutablePersonDemographicsCSV (implements io.github.ai4ci.output.PersonDemographicsCSV)
  • io.github.ai4ci.output.ImmutablePersonDemographicsCSV.Builder
  • io.github.ai4ci.abm.ImmutablePersonHistory (implements io.github.ai4ci.abm.PersonHistory)
  • io.github.ai4ci.abm.ImmutablePersonHistory.Builder
  • io.github.ai4ci.abm.ImmutablePersonState (implements io.github.ai4ci.abm.PersonState)
  • io.github.ai4ci.abm.ImmutablePersonState.Builder
  • io.github.ai4ci.output.ImmutablePersonStateCSV (implements io.github.ai4ci.output.PersonStateCSV)
  • io.github.ai4ci.output.ImmutablePersonStateCSV.Builder
  • io.github.ai4ci.config.inhost.ImmutablePhenomenologicalModel (implements io.github.ai4ci.config.inhost.PhenomenologicalModel)
  • io.github.ai4ci.config.inhost.ImmutablePhenomenologicalModel.Builder
  • io.github.ai4ci.util.ImmutableResampledDistribution (implements io.github.ai4ci.util.ResampledDistribution)
  • io.github.ai4ci.util.ImmutableResampledDistribution.Builder
  • io.github.ai4ci.config.riskmodel.ImmutableRiskKernelInBuilt (implements io.github.ai4ci.config.riskmodel.RiskKernelInBuilt)
  • io.github.ai4ci.config.riskmodel.ImmutableRiskKernelInBuilt.Builder
  • io.github.ai4ci.config.riskmodel.ImmutableRiskKernelProvided (implements io.github.ai4ci.config.riskmodel.RiskKernelProvided)
  • io.github.ai4ci.config.riskmodel.ImmutableRiskKernelProvided.Builder
  • io.github.ai4ci.abm.riskmodel.ImmutableRiskModel (implements io.github.ai4ci.abm.riskmodel.RiskModel)
  • io.github.ai4ci.abm.riskmodel.ImmutableRiskModel.Builder
  • io.github.ai4ci.util.ImmutableSimpleDistribution (implements io.github.ai4ci.util.SimpleDistribution)
  • io.github.ai4ci.util.ImmutableSimpleDistribution.Builder
  • io.github.ai4ci.config.inhost.ImmutableStochasticModel (implements io.github.ai4ci.config.inhost.StochasticModel)
  • io.github.ai4ci.config.inhost.ImmutableStochasticModel.Builder
  • io.github.ai4ci.config.ImmutableTestParameters (implements io.github.ai4ci.config.TestParameters)
  • io.github.ai4ci.config.ImmutableTestParameters.Builder
  • io.github.ai4ci.abm.ImmutableTestResult (implements io.github.ai4ci.abm.TestResult)
  • io.github.ai4ci.abm.ImmutableTestResult.Builder
  • io.github.ai4ci.util.ImmutableTransformedDistribution (implements io.github.ai4ci.util.TransformedDistribution)
  • io.github.ai4ci.util.ImmutableTransformedDistribution.Builder
  • io.github.ai4ci.config.setup.ImmutableWattsStrogatzConfiguration (implements io.github.ai4ci.config.setup.WattsStrogatzConfiguration)
  • io.github.ai4ci.config.setup.ImmutableWattsStrogatzConfiguration.Builder (implements io.github.ai4ci.config.setup.WattsStrogatzConfiguration.Builder)
  • io.github.ai4ci.config.ImmutableWattsStrogatzFacet (implements io.github.ai4ci.config.ExperimentFacet.WattsStrogatzFacet)
  • io.github.ai4ci.config.ImmutableWattsStrogatzFacet.Builder
  • io.github.ai4ci.output.InfectivityProfileCSV.Selector (implements io.github.ai4ci.Export.Selector)
  • java.io.InputStream (implements java.io.Closeable)
    • io.github.ai4ci.util.Cloner.FastByteArrayInputStream
  • io.github.ai4ci.JPanSim2
  • io.github.ai4ci.util.ModelNav
  • io.github.ai4ci.abm.mechanics.ModelOperation
  • io.github.ai4ci.abm.mechanics.ModelOperation.UpdateStage<FACTORY,INPUT>
    • io.github.ai4ci.abm.mechanics.ModelOperation.OutbreakStateUpdater
    • io.github.ai4ci.abm.mechanics.ModelOperation.PersonStateUpdater
  • io.github.ai4ci.abm.ModelUpdate
  • io.github.ai4ci.config.ModifiableExperimentConfiguration (implements io.github.ai4ci.config.ExperimentConfiguration)
  • io.github.ai4ci.abm.ModifiableOutbreak (implements io.github.ai4ci.abm.Outbreak)
  • io.github.ai4ci.abm.mechanics.ModifiableStateMachineContext (implements io.github.ai4ci.abm.mechanics.StateMachineContext)
  • io.github.ai4ci.output.OutbreakCSV.Selector (implements io.github.ai4ci.Export.Selector)
  • io.github.ai4ci.output.OutbreakFinalStateCSV.Selector (implements io.github.ai4ci.Export.Selector)
  • io.github.ai4ci.output.OutbreakHistoryCSV.Selector (implements io.github.ai4ci.Export.Selector)
  • java.io.OutputStream (implements java.io.Closeable, java.io.Flushable)
    • io.github.ai4ci.util.Cloner.FastByteArrayOutputStream
    • io.github.ai4ci.util.Cloner.MockOutputStream
    • io.github.ai4ci.util.FastWriteOnlyOutputStream
  • org.apache.commons.lang3.tuple.Pair<L,R> (implements java.lang.Comparable<T>, java.util.Map.Entry<K,V>, java.io.Serializable)
    • org.apache.commons.lang3.tuple.ImmutablePair<L,R>
      • io.github.ai4ci.util.Binomial.Confidence
    • org.apache.commons.lang3.tuple.MutablePair<L,R>
      • io.github.ai4ci.util.Binomial
  • io.github.ai4ci.config.setup.PartialAgeStratifiedNetworkConfiguration (implements io.github.ai4ci.config.setup.AgeStratifiedNetworkConfiguration._PartialAgeStratifiedNetworkConfiguration)
  • io.github.ai4ci.config.setup.PartialAgeStratifiedNetworkConfiguration.Builder
  • io.github.ai4ci.config.PartialDemographicAdjustment (implements io.github.ai4ci.config.DemographicAdjustment._PartialDemographicAdjustment)
  • io.github.ai4ci.config.PartialDemographicAdjustment.Builder
  • io.github.ai4ci.config.PartialExecutionConfiguration (implements io.github.ai4ci.config.ExecutionConfiguration._PartialExecutionConfiguration)
  • io.github.ai4ci.config.PartialExecutionConfiguration.Builder
  • io.github.ai4ci.config.inhost.PartialMarkovStateModel (implements io.github.ai4ci.config.inhost.MarkovStateModel._PartialMarkovStateModel)
  • io.github.ai4ci.config.inhost.PartialMarkovStateModel.Builder
  • io.github.ai4ci.config.inhost.PartialPhenomenologicalModel (implements io.github.ai4ci.config.inhost.PhenomenologicalModel._PartialPhenomenologicalModel)
  • io.github.ai4ci.config.inhost.PartialPhenomenologicalModel.Builder
  • io.github.ai4ci.config.inhost.PartialStochasticModel (implements io.github.ai4ci.config.inhost.StochasticModel._PartialStochasticModel)
  • io.github.ai4ci.config.inhost.PartialStochasticModel.Builder
  • io.github.ai4ci.config.setup.PartialWattsStrogatzConfiguration (implements io.github.ai4ci.config.setup.WattsStrogatzConfiguration._PartialWattsStrogatzConfiguration)
  • io.github.ai4ci.config.setup.PartialWattsStrogatzConfiguration.Builder
  • io.github.ai4ci.abm.Person (implements io.github.ai4ci.abm.mechanics.Abstraction.Entity, io.github.ai4ci.abm.mechanics.Abstraction.HistoricalStateProvider<H>)
    • io.github.ai4ci.abm.ModifiablePerson
  • io.github.ai4ci.output.PersonDemographicsCSV.Selector (implements io.github.ai4ci.Export.Selector)
  • io.github.ai4ci.abm.mechanics.PersonStateContacts (implements java.io.Serializable)
  • io.github.ai4ci.output.PersonStateCSV.Selector (implements io.github.ai4ci.Export.Selector)
  • io.github.ai4ci.util.ReflectionUtils
  • io.github.ai4ci.util.Sampler (implements org.apache.commons.rng.UniformRandomProvider)
  • io.github.ai4ci.util.SimpleAsyncFileWriter (implements io.github.ai4ci.flow.CSVWriter.Queue)
  • io.github.ai4ci.flow.SimulationMonitor (implements java.lang.Runnable)
  • io.github.ai4ci.SlurmAwareLogger
  • io.github.ai4ci.util.SplineInterpolator (implements java.io.Serializable)
  • io.github.ai4ci.flow.StateExporter (implements java.io.Closeable)
  • io.github.ai4ci.flow.StateExporter.ExportSelector<X>
  • io.github.ai4ci.abm.mechanics.StateMachine (implements java.io.Serializable)
  • io.github.ai4ci.abm.mechanics.StateUtils
  • java.lang.Thread (implements java.lang.Runnable)
    • io.github.ai4ci.util.PauseableThread
      • io.github.ai4ci.flow.SimulationExecutor
      • io.github.ai4ci.flow.SimulationFactory
    • io.github.ai4ci.flow.QueueWriter (implements io.github.ai4ci.flow.CSVWriter.Queue)
  • io.github.ai4ci.util.ThreadSafeArray<X> (implements java.io.Serializable)
  • io.github.ai4ci.util.ThreadSafeBuffer<X> (implements java.util.concurrent.BlockingQueue<E>, java.io.Serializable)
  • java.lang.Throwable (implements java.io.Serializable)
    • java.lang.Exception
      • java.lang.RuntimeException
        • io.github.ai4ci.util.Sampler.OutOfRangeException
        • io.github.ai4ci.util.ThreadSafeArray.OutOfSpaceException
  • io.github.ai4ci.abm.mechanics.Updater

Interface Hierarchy

• io.github.ai4ci.abm.mechanics.Abstraction
• io.github.ai4ci.abm.mechanics.Abstraction.Distribution
  • io.github.ai4ci.util.EmpiricalDistribution (also extends java.io.Serializable)
  • io.github.ai4ci.util.HistogramDistribution (also extends java.io.Serializable)
  • io.github.ai4ci.util.ResampledDistribution (also extends java.io.Serializable)
  • io.github.ai4ci.util.SimpleDistribution (also extends java.io.Serializable)
  • io.github.ai4ci.util.TransformedDistribution
• io.github.ai4ci.abm.mechanics.Abstraction.HistoricalStateProvider<H>
  • io.github.ai4ci.abm.Outbreak (also extends io.github.ai4ci.abm.mechanics.Abstraction.Entity, java.lang.Cloneable)
• io.github.ai4ci.abm.mechanics.Abstraction.Modification<X>
  • io.github.ai4ci.config.setup.AgeStratifiedNetworkConfiguration._PartialAgeStratifiedNetworkConfiguration (also extends io.github.ai4ci.config.setup.AgeStratifiedNetworkConfiguration)
  • io.github.ai4ci.config.ExecutionConfiguration._PartialExecutionConfiguration (also extends io.github.ai4ci.config.ExecutionConfiguration)
  • io.github.ai4ci.config.inhost.MarkovStateModel._PartialMarkovStateModel (also extends io.github.ai4ci.config.inhost.MarkovStateModel)
  • io.github.ai4ci.config.inhost.PhenomenologicalModel._PartialPhenomenologicalModel (also extends io.github.ai4ci.config.inhost.PhenomenologicalModel)
  • io.github.ai4ci.config.inhost.StochasticModel._PartialStochasticModel (also extends io.github.ai4ci.config.inhost.StochasticModel)
  • io.github.ai4ci.config.setup.WattsStrogatzConfiguration._PartialWattsStrogatzConfiguration (also extends io.github.ai4ci.config.setup.WattsStrogatzConfiguration)
• io.github.ai4ci.abm.mechanics.Abstraction.Named
  • io.github.ai4ci.config.ExecutionConfiguration (also extends io.github.ai4ci.abm.mechanics.Abstraction.Replica, io.github.ai4ci.config.DemographicAdjustment.Execution<DIST,NUMERIC>, java.io.Serializable)
    • io.github.ai4ci.config.ExecutionConfiguration._PartialExecutionConfiguration (also extends io.github.ai4ci.abm.mechanics.Abstraction.Modification<X>)
  • io.github.ai4ci.config.ExperimentFacet.ExecutionFacet
  • io.github.ai4ci.config.ExperimentFacet.SetupFacet<X>
    • io.github.ai4ci.config.ExperimentFacet.AgeStratifiedNetworkFacet
    • io.github.ai4ci.config.ExperimentFacet.WattsStrogatzFacet
  • io.github.ai4ci.config.setup.SetupConfiguration (also extends io.github.ai4ci.abm.mechanics.Abstraction.Replica, java.io.Serializable)
    • io.github.ai4ci.config.setup.AgeStratifiedNetworkConfiguration
      • io.github.ai4ci.config.setup.AgeStratifiedNetworkConfiguration._PartialAgeStratifiedNetworkConfiguration (also extends io.github.ai4ci.abm.mechanics.Abstraction.Modification<X>)
    • io.github.ai4ci.config.setup.WattsStrogatzConfiguration
      • io.github.ai4ci.config.setup.WattsStrogatzConfiguration._PartialWattsStrogatzConfiguration (also extends io.github.ai4ci.abm.mechanics.Abstraction.Modification<X>)
• io.github.ai4ci.abm.mechanics.Abstraction.Replica
  • io.github.ai4ci.config.ExecutionConfiguration (also extends io.github.ai4ci.abm.mechanics.Abstraction.Named, io.github.ai4ci.config.DemographicAdjustment.Execution<DIST,NUMERIC>, java.io.Serializable)
    • io.github.ai4ci.config.ExecutionConfiguration._PartialExecutionConfiguration (also extends io.github.ai4ci.abm.mechanics.Abstraction.Modification<X>)
  • io.github.ai4ci.config.setup.SetupConfiguration (also extends io.github.ai4ci.abm.mechanics.Abstraction.Named, java.io.Serializable)
    • io.github.ai4ci.config.setup.AgeStratifiedNetworkConfiguration
      • io.github.ai4ci.config.setup.AgeStratifiedNetworkConfiguration._PartialAgeStratifiedNetworkConfiguration (also extends io.github.ai4ci.abm.mechanics.Abstraction.Modification<X>)
    • io.github.ai4ci.config.setup.WattsStrogatzConfiguration
      • io.github.ai4ci.config.setup.WattsStrogatzConfiguration._PartialWattsStrogatzConfiguration (also extends io.github.ai4ci.abm.mechanics.Abstraction.Modification<X>)
• io.github.ai4ci.abm.mechanics.Abstraction.SimpleFunction
  • io.github.ai4ci.util.EmpiricalFunction (also extends java.io.Serializable)
  • io.github.ai4ci.util.FixedValueFunction (also extends java.io.Serializable)
• io.github.ai4ci.abm.builders.AgeStratifiedNetworkSetup
• io.github.ai4ci.config.BatchConfiguration
• java.lang.Cloneable
  • io.github.ai4ci.abm.Outbreak (also extends io.github.ai4ci.abm.mechanics.Abstraction.Entity, io.github.ai4ci.abm.mechanics.Abstraction.HistoricalStateProvider<H>)
  • io.github.ai4ci.abm.OutbreakTemporalState (also extends io.github.ai4ci.abm.mechanics.Abstraction.TemporalState<E>)
    • io.github.ai4ci.abm.OutbreakHistory
    • io.github.ai4ci.abm.OutbreakState
• io.github.ai4ci.output.CommonCSV
• io.github.ai4ci.flow.CSVWriter.Queue
• io.github.ai4ci.flow.CSVWriter.Writeable
  • io.github.ai4ci.output.CommonCSV.Model
    • io.github.ai4ci.output.CommonCSV.Execution
      • io.github.ai4ci.output.CommonCSV.State
        • io.github.ai4ci.output.ContactCSV
        • io.github.ai4ci.output.OutbreakCSV
        • io.github.ai4ci.output.OutbreakFinalStateCSV
        • io.github.ai4ci.output.OutbreakHistoryCSV
        • io.github.ai4ci.output.PersonStateCSV
      • io.github.ai4ci.output.DebugParametersCSV
      • io.github.ai4ci.output.OutbreakConfigurationJson
      • io.github.ai4ci.output.PersonDemographicsCSV
    • io.github.ai4ci.output.InfectivityProfileCSV
• io.github.ai4ci.abm.builders.DefaultInHostMarkovStateInitialiser
  • io.github.ai4ci.abm.builders.DefaultPersonInitialiser (also extends io.github.ai4ci.abm.builders.DefaultInHostPhenomenologicalStateInitialiser, io.github.ai4ci.abm.builders.DefaultInHostStochasticStateInitialiser)
• io.github.ai4ci.abm.builders.DefaultInHostPhenomenologicalStateInitialiser
  • io.github.ai4ci.abm.builders.DefaultPersonInitialiser (also extends io.github.ai4ci.abm.builders.DefaultInHostMarkovStateInitialiser, io.github.ai4ci.abm.builders.DefaultInHostStochasticStateInitialiser)
• io.github.ai4ci.abm.builders.DefaultInHostStochasticStateInitialiser
  • io.github.ai4ci.abm.builders.DefaultPersonInitialiser (also extends io.github.ai4ci.abm.builders.DefaultInHostMarkovStateInitialiser, io.github.ai4ci.abm.builders.DefaultInHostPhenomenologicalStateInitialiser)
• io.github.ai4ci.abm.builders.DefaultNetworkSetup
• io.github.ai4ci.abm.builders.DefaultOutbreakBaseliner
• io.github.ai4ci.abm.builders.DefaultOutbreakInitialiser
• io.github.ai4ci.abm.builders.DefaultPersonBaseliner
• io.github.ai4ci.config.DemographicAdjustment
• io.github.ai4ci.config.DemographicAdjustment.Execution<DIST,NUMERIC>
  • io.github.ai4ci.config.DemographicAdjustment._PartialDemographicAdjustment (also extends io.github.ai4ci.config.DemographicAdjustment.Markov<DIST,NUMERIC>, io.github.ai4ci.config.DemographicAdjustment.Phenomenological<DIST,NUMERIC>, java.io.Serializable)
  • io.github.ai4ci.config.ExecutionConfiguration (also extends io.github.ai4ci.abm.mechanics.Abstraction.Named, io.github.ai4ci.abm.mechanics.Abstraction.Replica, java.io.Serializable)
    • io.github.ai4ci.config.ExecutionConfiguration._PartialExecutionConfiguration (also extends io.github.ai4ci.abm.mechanics.Abstraction.Modification<X>)
• io.github.ai4ci.config.DemographicAdjustment.Markov<DIST,NUMERIC>
  • io.github.ai4ci.config.DemographicAdjustment._PartialDemographicAdjustment (also extends io.github.ai4ci.config.DemographicAdjustment.Execution<DIST,NUMERIC>, io.github.ai4ci.config.DemographicAdjustment.Phenomenological<DIST,NUMERIC>, java.io.Serializable)
  • io.github.ai4ci.config.inhost.MarkovStateModel (also extends io.github.ai4ci.config.inhost.InHostConfiguration)
    • io.github.ai4ci.config.inhost.MarkovStateModel._PartialMarkovStateModel (also extends io.github.ai4ci.abm.mechanics.Abstraction.Modification<X>)
• io.github.ai4ci.config.DemographicAdjustment.Phenomenological<DIST,NUMERIC>
  • io.github.ai4ci.config.DemographicAdjustment._PartialDemographicAdjustment (also extends io.github.ai4ci.config.DemographicAdjustment.Execution<DIST,NUMERIC>, io.github.ai4ci.config.DemographicAdjustment.Markov<DIST,NUMERIC>, java.io.Serializable)
  • io.github.ai4ci.config.inhost.PhenomenologicalModel (also extends io.github.ai4ci.config.inhost.InHostConfiguration)
    • io.github.ai4ci.config.inhost.PhenomenologicalModel._PartialPhenomenologicalModel (also extends io.github.ai4ci.abm.mechanics.Abstraction.Modification<X>)
• io.github.ai4ci.config.ExperimentConfiguration
• io.github.ai4ci.config.ExperimentFacet
• io.github.ai4ci.config.ExperimentOverride
• io.github.ai4ci.abm.Exposure
• java.util.function.Function<T,R>
  • io.github.ai4ci.Export.Selector
• java.io.Serializable
  • io.github.ai4ci.abm.mechanics.Abstraction.Entity
    • io.github.ai4ci.abm.Outbreak (also extends io.github.ai4ci.abm.mechanics.Abstraction.HistoricalStateProvider<H>, java.lang.Cloneable)
  • io.github.ai4ci.abm.mechanics.Abstraction.TemporalState<E>
    • io.github.ai4ci.abm.OutbreakTemporalState (also extends java.lang.Cloneable)
      • io.github.ai4ci.abm.OutbreakHistory
      • io.github.ai4ci.abm.OutbreakState
    • io.github.ai4ci.abm.PersonTemporalState
      • io.github.ai4ci.abm.PersonHistory
      • io.github.ai4ci.abm.PersonState
  • io.github.ai4ci.abm.Contact
  • io.github.ai4ci.config.DemographicAdjustment._PartialDemographicAdjustment (also extends io.github.ai4ci.config.DemographicAdjustment.Execution<DIST,NUMERIC>, io.github.ai4ci.config.DemographicAdjustment.Markov<DIST,NUMERIC>, io.github.ai4ci.config.DemographicAdjustment.Phenomenological<DIST,NUMERIC>)
  • io.github.ai4ci.util.EmpiricalDistribution (also extends io.github.ai4ci.abm.mechanics.Abstraction.Distribution)
  • io.github.ai4ci.util.EmpiricalFunction (also extends io.github.ai4ci.abm.mechanics.Abstraction.SimpleFunction)
  • io.github.ai4ci.config.ExecutionConfiguration (also extends io.github.ai4ci.abm.mechanics.Abstraction.Named, io.github.ai4ci.abm.mechanics.Abstraction.Replica, io.github.ai4ci.config.DemographicAdjustment.Execution<DIST,NUMERIC>)
    • io.github.ai4ci.config.ExecutionConfiguration._PartialExecutionConfiguration (also extends io.github.ai4ci.abm.mechanics.Abstraction.Modification<X>)
  • io.github.ai4ci.abm.inhost.ExposureModel
  • io.github.ai4ci.abm.inhost.ExposureModel.BiPhasicLogistic
  • io.github.ai4ci.util.FixedValueFunction (also extends io.github.ai4ci.abm.mechanics.Abstraction.SimpleFunction)
  • io.github.ai4ci.util.HistogramDistribution (also extends io.github.ai4ci.abm.mechanics.Abstraction.Distribution)
  • io.github.ai4ci.config.inhost.InHostConfiguration
    • io.github.ai4ci.config.inhost.MarkovStateModel (also extends io.github.ai4ci.config.DemographicAdjustment.Markov<DIST,NUMERIC>)
      • io.github.ai4ci.config.inhost.MarkovStateModel._PartialMarkovStateModel (also extends io.github.ai4ci.abm.mechanics.Abstraction.Modification<X>)
    • io.github.ai4ci.config.inhost.PhenomenologicalModel (also extends io.github.ai4ci.config.DemographicAdjustment.Phenomenological<DIST,NUMERIC>)
      • io.github.ai4ci.config.inhost.PhenomenologicalModel._PartialPhenomenologicalModel (also extends io.github.ai4ci.abm.mechanics.Abstraction.Modification<X>)
    • io.github.ai4ci.config.inhost.StochasticModel
      • io.github.ai4ci.config.inhost.StochasticModel._PartialStochasticModel (also extends io.github.ai4ci.abm.mechanics.Abstraction.Modification<X>)
  • io.github.ai4ci.abm.inhost.InHostMarkovState.InHostMarkovStateMachine
  • io.github.ai4ci.abm.inhost.InHostModelState<CFG>
    • io.github.ai4ci.abm.inhost.InHostMarkovState
    • io.github.ai4ci.abm.inhost.InHostPhenomenologicalState
    • io.github.ai4ci.abm.inhost.InHostStochasticState
  • io.github.ai4ci.abm.riskmodel.Kernel
  • io.github.ai4ci.abm.mechanics.ModelOperation.BiFunction<A,B,R>
  • io.github.ai4ci.abm.mechanics.ModelOperation.TriConsumer<A,B,C>
  • io.github.ai4ci.abm.mechanics.ModelOperation.TriFunction<A,B,C,R>
  • io.github.ai4ci.abm.OutbreakBaseline
  • io.github.ai4ci.abm.PersonBaseline
  • io.github.ai4ci.abm.PersonDemographic
  • io.github.ai4ci.util.ResampledDistribution (also extends io.github.ai4ci.abm.mechanics.Abstraction.Distribution)
  • io.github.ai4ci.config.riskmodel.RiskKernelConfiguration
    • io.github.ai4ci.config.riskmodel.RiskKernelInBuilt
    • io.github.ai4ci.config.riskmodel.RiskKernelProvided
  • io.github.ai4ci.abm.riskmodel.RiskModel
  • io.github.ai4ci.config.setup.SetupConfiguration (also extends io.github.ai4ci.abm.mechanics.Abstraction.Named, io.github.ai4ci.abm.mechanics.Abstraction.Replica)
    • io.github.ai4ci.config.setup.AgeStratifiedNetworkConfiguration
      • io.github.ai4ci.config.setup.AgeStratifiedNetworkConfiguration._PartialAgeStratifiedNetworkConfiguration (also extends io.github.ai4ci.abm.mechanics.Abstraction.Modification<X>)
    • io.github.ai4ci.config.setup.WattsStrogatzConfiguration
      • io.github.ai4ci.config.setup.WattsStrogatzConfiguration._PartialWattsStrogatzConfiguration (also extends io.github.ai4ci.abm.mechanics.Abstraction.Modification<X>)
  • io.github.ai4ci.util.SimpleDistribution (also extends io.github.ai4ci.abm.mechanics.Abstraction.Distribution)
  • io.github.ai4ci.abm.mechanics.State<BUILDER,HISTORY,STATE,X>
    • io.github.ai4ci.abm.mechanics.StateMachine.BehaviourState
      • io.github.ai4ci.abm.behaviour.BehaviourModel
      • io.github.ai4ci.abm.mechanics.StateUtils.DefaultNoTesting
      • io.github.ai4ci.abm.mechanics.StateUtils.DoesPCRIfSymptomatic
    • io.github.ai4ci.abm.mechanics.StateMachine.PolicyState
      • io.github.ai4ci.abm.policy.PolicyModel
  • io.github.ai4ci.abm.mechanics.StateMachineContext
  • io.github.ai4ci.config.TestParameters
  • io.github.ai4ci.abm.TestResult
• io.github.ai4ci.config.setup.SetupConfiguration.Builder
  • io.github.ai4ci.config.setup.AgeStratifiedNetworkConfiguration.Builder
  • io.github.ai4ci.config.setup.WattsStrogatzConfiguration.Builder

Annotation Type Hierarchy

• io.github.ai4ci.Data (implements java.lang.annotation.Annotation)
• io.github.ai4ci.Data.Mutable (implements java.lang.annotation.Annotation)
• io.github.ai4ci.Data.Partial (implements java.lang.annotation.Annotation)
• io.github.ai4ci.Data.Style (implements java.lang.annotation.Annotation)
• io.github.ai4ci.config.DemographicAdjustment.Scale (implements java.lang.annotation.Annotation)
• io.github.ai4ci.Export (implements java.lang.annotation.Annotation)

Enum Hierarchy

• java.lang.Object
  • java.lang.Enum<E> (implements java.lang.Comparable<T>, java.lang.constant.Constable, java.io.Serializable)
    • io.github.ai4ci.config.DemographicAdjustment.ScaleType
    • io.github.ai4ci.util.EmpiricalFunction.Link
    • io.github.ai4ci.Export.Stage
    • io.github.ai4ci.config.Exporters
    • io.github.ai4ci.abm.inhost.InHostMarkovState.DiseaseState
    • io.github.ai4ci.abm.inhost.InHostMarkovState.SymptomState
    • io.github.ai4ci.config.riskmodel.Kernels
    • io.github.ai4ci.abm.behaviour.LockdownIsolation (implements io.github.ai4ci.abm.behaviour.BehaviourModel, io.github.ai4ci.abm.mechanics.StateUtils.DoesPCRIfSymptomatic)
    • io.github.ai4ci.abm.ModelUpdate.OutbreakUpdaterFn
    • io.github.ai4ci.abm.ModelUpdate.PersonUpdaterFn
    • io.github.ai4ci.abm.policy.NoControl (implements io.github.ai4ci.abm.policy.PolicyModel)
    • io.github.ai4ci.abm.behaviour.NonCompliant (implements io.github.ai4ci.abm.behaviour.BehaviourModel, io.github.ai4ci.abm.mechanics.StateUtils.DefaultNoTesting)
    • io.github.ai4ci.abm.policy.ReactiveLockdown (implements io.github.ai4ci.abm.policy.PolicyModel)
    • io.github.ai4ci.abm.behaviour.ReactiveTestAndIsolate (implements io.github.ai4ci.abm.behaviour.BehaviourModel, io.github.ai4ci.abm.mechanics.StateUtils.DefaultNoTesting)
    • io.github.ai4ci.util.SimpleDistribution.Type
    • io.github.ai4ci.abm.behaviour.SmartAgentLFTTesting (implements io.github.ai4ci.abm.behaviour.BehaviourModel, io.github.ai4ci.abm.mechanics.StateUtils.DefaultNoTesting)
    • io.github.ai4ci.abm.behaviour.SmartAgentTesting (implements io.github.ai4ci.abm.behaviour.BehaviourModel, io.github.ai4ci.abm.mechanics.StateUtils.DefaultNoTesting)
    • io.github.ai4ci.abm.behaviour.Test (implements io.github.ai4ci.abm.behaviour.BehaviourModel, io.github.ai4ci.abm.mechanics.StateUtils.DefaultNoTesting)
    • io.github.ai4ci.abm.TestResult.Result
    • io.github.ai4ci.abm.TestResult.Type