Package io.github.ai4ci.config.inhost

Interface MarkovStateModel

All Superinterfaces:

DemographicAdjustment.Markov<Abstraction.Distribution,Double>, InHostConfiguration, Serializable

All Known Subinterfaces:

MarkovStateModel._PartialMarkovStateModel

All Known Implementing Classes:

ImmutableMarkovStateModel, PartialMarkovStateModel

@Immutable
public interface MarkovStateModel
extends InHostConfiguration, DemographicAdjustment.Markov<Abstraction.Distribution,Double>

Nested Class Summary

Nested Classes

Modifier and Type	Interface	Description
static interface	MarkovStateModel._PartialMarkovStateModel

Field Summary

Fields

Modifier and Type	Field	Description
static final ImmutableMarkovStateModel	DEFAULT

Fields inherited from interface io.github.ai4ci.config.inhost.InHostConfiguration

LIMIT, log

Method Summary

Modifier and Type	Method	Description
Abstraction.Distribution	getImmuneWaningHalfLife()
Abstraction.Distribution	getIncubationPeriod()
Abstraction.Distribution	getInfectiousDuration()
default double	getSeverityFatalityCutoff(Outbreak outbreak, ExecutionConfiguration configuration)
default double	getSeverityHospitalisationCutoff(Outbreak outbreak, ExecutionConfiguration configuration)	lets say 40% asymptomatic and case hosp rate of 10%.
default double	getSeveritySymptomsCutoff(Outbreak outbreak, ExecutionConfiguration configuration)
Abstraction.Distribution	getSymptomDuration()

Field Details

DEFAULT

static final ImmutableMarkovStateModel DEFAULT

Method Details

getIncubationPeriod

Abstraction.Distribution getIncubationPeriod()

Specified by:

getIncubationPeriod in interface DemographicAdjustment.Markov<Abstraction.Distribution,Double>

getInfectiousDuration

Abstraction.Distribution getInfectiousDuration()

Specified by:

getInfectiousDuration in interface DemographicAdjustment.Markov<Abstraction.Distribution,Double>

getSymptomDuration

Abstraction.Distribution getSymptomDuration()

Specified by:

getSymptomDuration in interface DemographicAdjustment.Markov<Abstraction.Distribution,Double>

getImmuneWaningHalfLife

Abstraction.Distribution getImmuneWaningHalfLife()

Specified by:

getImmuneWaningHalfLife in interface DemographicAdjustment.Markov<Abstraction.Distribution,Double>

getSeveritySymptomsCutoff

default double getSeveritySymptomsCutoff(Outbreak outbreak,
 ExecutionConfiguration configuration)

Specified by:

getSeveritySymptomsCutoff in interface InHostConfiguration

getSeverityHospitalisationCutoff

default double getSeverityHospitalisationCutoff(Outbreak outbreak,
 ExecutionConfiguration configuration)

Description copied from interface: InHostConfiguration

lets say 40% asymptomatic and case hosp rate of 10%. The IHR overall is 10% of the 60% symptomatic, so 6% The cutoff is the people that don;t get hospitalised so 94% quantile.

Specified by:

getSeverityHospitalisationCutoff in interface InHostConfiguration

getSeverityFatalityCutoff

default double getSeverityFatalityCutoff(Outbreak outbreak,
 ExecutionConfiguration configuration)

Specified by:

getSeverityFatalityCutoff in interface InHostConfiguration