InHostMarkovState.InHostMarkovStateMachine (jpansim2 0.2.0 API)

All Superinterfaces:: Serializable

All Known Implementing Classes:: ImmutableInHostMarkovStateMachine

Enclosing interface:: InHostMarkovState

@Immutable public static interface InHostMarkovState.InHostMarkovStateMachine extends Serializable

Method Summary

Modifier and Type

Method

Description

double

getPAsymptomaticSymptomatic()

this is the per day probability of becoming symptomatic given that you are infected. it is 1-(1-infection_case_rate)^duration_of_infection

double

getPExposedInfectious()

double

getPHospitalisedAsymptomatic()

double

getPHospitalisedDead()

double

getPImmuneSusceptible()

double

getPInfectiousImmune()

double

getPSymptomaticAsymptomatic()

double

getPSymptomaticDead()

double

getPSymptomaticHospitalised()

default InHostMarkovState.DiseaseState

updateDiseaseState(InHostMarkovState.DiseaseState current, Sampler rng)

default InHostMarkovState.SymptomState

updateSymptomState(InHostMarkovState.SymptomState current, InHostMarkovState.DiseaseState dx, Sampler rng)

Method Details
- getPExposedInfectious
  
  double getPExposedInfectious()
- getPInfectiousImmune
  
  double getPInfectiousImmune()
- getPImmuneSusceptible
  
  double getPImmuneSusceptible()
- getPAsymptomaticSymptomatic
  
  double getPAsymptomaticSymptomatic()
  
  this is the per day probability of becoming symptomatic given that you are infected. it is 1-(1-infection_case_rate)^duration_of_infection
  
  Returns:
- getPSymptomaticAsymptomatic
  
  double getPSymptomaticAsymptomatic()
- getPSymptomaticHospitalised
  
  double getPSymptomaticHospitalised()
- getPSymptomaticDead
  
  double getPSymptomaticDead()
- getPHospitalisedDead
  
  double getPHospitalisedDead()
- getPHospitalisedAsymptomatic
  
  double getPHospitalisedAsymptomatic()
- updateDiseaseState
  
  default InHostMarkovState.DiseaseState updateDiseaseState(InHostMarkovState.DiseaseState current, Sampler rng)
- updateSymptomState
  
  default InHostMarkovState.SymptomState updateSymptomState(InHostMarkovState.SymptomState current, InHostMarkovState.DiseaseState dx, Sampler rng)