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Data from van Kampen et al, 2019, describing duration of viral shedding from symptom onset in patients with COVID-19.

Usage

data("viral_shedding")

Format

An object of class list of length 2.

Details

viral_shedding named list with 2 items

original (df original*)

original description

resampled (df resampled*)

resampled description

df original dataframe with 690 rows and 4 columns

duration of symptoms in days (dbl)

duration of symptoms in days

RNA copies per mL (chr)

RNA copies per mL

PRNT titer (chr)

PRNT titer

virus culture result (chr)

virus culture result

df resampled dataframe with 2600 rows and 3 columns

tau (int)

time from symptom onset to measurement

probability (dbl)

probability of detected viral excretion

boot (int)

a bootstrap identifier

References

van Kampen, J.J.A., van de Vijver, D.A.M.C., Fraaij, P.L.A. et al. Duration and key determinants of infectious virus shedding in hospitalized patients with coronavirus disease-2019 (COVID-19). Nat Commun 12, 267 (2021). https://doi.org/10.1038/s41467-020-20568-4