John Hopkins data from the early outbreak — early_global

Mined out the commit history of COVID-19 Data Repository by the Center for Systems Science and Engineering (CSSE) at Johns Hopkins University this dataset has early outbreak trajectories (21st Jan 2020 up to March 8th 2020) for a wide range of geographies, for confirmed cases, deaths and recovered cases. These trajectories are based on reported date, but are occasionally revised which will vary from region to region and maybe between different statistics, which show up as infrequent changes in published estimates over time.

Usage

data("early_global_combined")

Format

An object of class tbl_df (inherits from tbl, data.frame) with 104036 rows and 9 columns.

Source

https://github.com/CSSEGISandData/COVID-19

Details

This data set is originally licensed under the Creative Commons Attribution 4.0 International (CC BY 4.0) by the Johns Hopkins University on behalf of its Center for Systems Science in Engineering. Copyright Johns Hopkins University 2020.

country (chr): The country
province (chr): Sub-national division
lat (dbl): Latitude
long (dbl): Longitude
reported_date (date): Date of the observation based on reports of cases on this date.
total_cases (dbl): Cumulative cases
published_date (date): Date the observation was published on the JHU github.
total_deaths (dbl): Cumulative deaths
total_recovered (dbl): Cumulative recovered

Examples

dplyr::glimpse(early_global_combined)
#> Rows: 104,036
#> Columns: 9
#> $ country         <chr> "Mainland China", "Mainland China", "Mainland China", …
#> $ province        <chr> "Anhui", "Beijing", "Chongqing", "Fujian", "Gansu", "G…
#> $ lat             <dbl> 31.82570, 40.18240, 30.05720, 26.07890, 36.06110, 23.3…
#> $ long            <dbl> 117.2264, 116.4142, 107.8740, 117.9874, 103.8343, 113.…
#> $ reported_date   <date> 2020-03-07, 2020-03-07, 2020-03-07, 2020-03-07, 2020-…
#> $ total_cases     <dbl> 990, 426, 576, 296, 120, 1352, 252, 146, 168, 318, 481…
#> $ published_date  <date> 2020-03-07, 2020-03-07, 2020-03-07, 2020-03-07, 2020-…
#> $ total_deaths    <dbl> 6, 8, 6, 1, 2, 7, 2, 2, 6, 6, 13, 22, 2959, 4, 1, 0, 1…
#> $ total_recovered <dbl> 979, 303, 526, 295, 87, 1237, 218, 115, 158, 307, 403,…